Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GACE_0945Putative zinc metalloprotease; Belongs to the peptidase M50B family. (350 aa)    
Predicted Functional Partners:
GACE_0944
Conjugal transfer protein TraB.
       0.944
GACE_0271
Hypothetical protein.
   
 
 0.797
rps4
SSU ribosomal protein S9e (S4p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
 
 
 0.711
GACE_0948
Membrane-bound ClpP-class protease.
 
     0.705
rpl4
LSU ribosomal protein L1e (L4p); Forms part of the polypeptide exit tunnel.
  
 
 0.678
GACE_0946
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.675
rpl40e
LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
  
 
   0.672
GACE_0947
Hypothetical protein.
       0.666
rps2
SSU ribosomal protein SAe (S2p); Belongs to the universal ribosomal protein uS2 family.
  
   0.664
rpl44e
LSU ribosomal protein L44e; Binds to the 23S rRNA.
  
 
   0.657
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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