STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GACE_1124Hypothetical protein. (509 aa)    
Predicted Functional Partners:
GACE_1123
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
  
 0.945
GACE_1117
dTDP-glucose 4,6-dehydratase.
  
  
 0.928
GACE_1116
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.924
GACE_1120
dTDP-4-dehydrorhamnose reductase.
  
  
 0.736
GACE_1144
UDP-N-acetylglucosamine 2-epimerase.
  
  
 0.709
GACE_1219
Glycosyltransferase.
 
  
 0.704
GACE_0494
Glycosyl transferase.
 
  
 0.699
GACE_1141
Glycosyl transferase, group 1.
  
  
 0.654
GACE_1132
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.590
gatC
Aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
    0.588
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.