Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GACE_1502Transcriptional regulator, AsnC family. (162 aa)    
Predicted Functional Partners:
GACE_0704
Transcriptional regulator, AsnC family.
   
 
 0.569
GACE_1669
Transcriptional regulator, AsnC family.
   
 
 0.569
GACE_1501
Long-chain-fatty-acid--CoA ligase.
       0.444
GACE_1504
Beta-lactamase domain protein.
       0.438
GACE_1503
Long-chain-fatty-acid--CoA ligase.
       0.436
GACE_1500
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.431
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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