Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GACE_1748Oxygen-independent coproporphyrinogen III oxidase. (290 aa)    
Predicted Functional Partners:
GACE_1371
Hypothetical protein.
  
  
 0.770
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.761
GACE_1747
Hypothetical protein.
       0.753
GACE_1749
Phenylacetate-coenzyme A ligase.
       0.585
GACE_1744
Archaeal histone.
       0.443
GACE_1750
Proline/sodium symporter PutP; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.421
GACE_1751
Transcriptional regulator, AsnC family.
  
    0.414
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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