Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GACE_1817Branched-chain amino acid transport ATP-binding protein LivG. (246 aa)    
Predicted Functional Partners:
GACE_1814
Branched-chain amino acid transport system permease protein LivM.
 
 
 0.996
GACE_1815
High-affinity branched-chain amino acid transport system permease protein LivH.
 
 
 0.996
GACE_1816
High-affinity leucine-specific transport system, periplasmic binding protein LivK.
 
 
 0.995
GACE_0784
Branched-chain amino acid transport system permease protein LivM.
 
 0.986
GACE_1410
Branched-chain amino acid transport system permease protein LivM.
 
 0.980
GACE_1818
Branched-chain amino acid transport ATP-binding protein LivF.
 
  
0.975
GACE_0783
Branched-chain amino acid ABC transporter, permease protein LivH.
 
 
 0.974
GACE_1411
High-affinity branched-chain amino acid transport system permease protein LivH.
 
 
 0.972
GACE_0782
Branched-chain amino acid ABC transporter, periplasmic binding protein.
 
 
 0.955
GACE_1412
Putative branched-chain amino acid transporter substrate-binding protein.
 
 
 0.952
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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