Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
GACE_2008Hypothetical protein. (454 aa)    
Predicted Functional Partners:
mptA
GTP cyclohydrolase; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
 
     0.950
cetZ
Cell division protein FtsZ; Involved in cell shape control; Belongs to the CetZ family.
 
   
 0.701
GACE_0530
Hypothetical protein.
 
 
 0.622
GACE_2144
Hypothetical protein.
 
 
 0.614
GACE_1735
V-type ATP synthase subunit K.
 
  
 0.580
GACE_0612
GTP-binding protein.
   
 0.556
GACE_1266
Bacterio-opsin activator domain-containing protein.
  
     0.520
GACE_1537
Hypothetical protein.
 
     0.520
GACE_0120
Hypothetical protein.
  
     0.518
GACE_0546
Uridine kinase.
 
  
 0.512
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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