Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GACE_2137ROK family protein. (257 aa)    
Predicted Functional Partners:
GACE_2136
Ribose 1,5-bisphosphate isomerase; Belongs to the eIF-2B alpha/beta/delta subunits family.
       0.923
GACE_1608
Ribokinase.
 
  
 0.655
GACE_0807
Ribokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.636
GACE_1288
Carbohydrate kinase.
 
  
 0.552
GACE_2138
Hypothetical protein.
       0.536
gap
Glyceraldehyde-3-phosphate dehydrogenase NAD(P)-dependent, phosphorylating.
     
 0.530
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.527
fbp
Fructose-1,6-bisphosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
     
 0.523
GACE_1066
Phosphomannomutase; Belongs to the phosphohexose mutase family.
 
  
 0.518
GACE_0276
Glutamate synthase domain 2; Belongs to the glutamate synthase family.
  
  
 0.495
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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