Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GACE_2152Bacterio-opsin activator domain-containing protein. (244 aa)    
Predicted Functional Partners:
GACE_0175
DNA binding protein.
 
     0.753
GACE_1999
Replication protein A.
  
     0.626
GACE_1715
Hypothetical protein.
  
     0.620
GACE_0938
Archaeal heat shock regulator, ArsR family.
  
     0.546
GACE_0678
Hypothetical protein.
  
     0.544
GACE_1168
Bacterio-opsin activator domain-containing protein.
  
     0.544
GACE_1266
Bacterio-opsin activator domain-containing protein.
 
     0.543
GACE_1172
Transcriptional regulator, TrmB family.
  
     0.542
GACE_2153
2-ketoisovalerate ferredoxin oxidoreductase, fused subunits gamma and delta.
       0.532
GACE_2154
2-ketoisovalerate ferredoxin oxidoreductase, alpha subunit.
       0.532
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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