Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GACE_2170LAO/AO transport system ATPase. (350 aa)    
Predicted Functional Partners:
GACE_2172
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 
 0.998
GACE_0747
methylmalonyl-CoA mutase, subunit alpha, N-terminus.
 
 0.994
GACE_0752
methylmalonyl-CoA mutase, subunit alpha, C-terminus.
 
 0.994
GACE_2171
Methylmalonyl-CoA mutase, C-terminal domain/subunit.
 
 0.994
GACE_0751
Methylmalonyl-CoA epimerase.
  
 0.899
GACE_2167
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.836
GACE_2169
ATP--cobalamin adenosyltransferase.
       0.811
GACE_2168
Transcriptional regulatory protein, putative.
       0.792
GACE_2173
Pimeloyl-CoA dehydrogenase, small subunit PimD.
       0.634
GACE_1858
Vitamin B12 ABC transporter, B12-binding component BtuF.
  
  
 0.469
Your Current Organism:
Geoglobus acetivorans
NCBI taxonomy Id: 565033
Other names: DSM 21716, G. acetivorans, Geoglobus acetivorans Slobodkina et al. 2009, Geoglobus sp. SBH6, VKM B-2522, strain SBH6
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