STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuBPutative outer membrane receptor. (648 aa)    
Predicted Functional Partners:
ACN84239.1
Hypothetical protein.
   
 
 0.808
ACN82889.1
Hypothetical protein.
       0.705
soj
Sporulation initiation inhibitor protein Soj.
    
 
 0.672
ACN83728.1
Hypothetical protein.
    
 
 0.672
ACN82890.1
Hypothetical protein.
       0.617
ACN82887.1
Hypothetical protein.
       0.574
ACN83137.1
Hypothetical protein.
    
 
 0.515
treP
Trep.
    
 
 0.515
metH
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.440
metH-2
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.440
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.