Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cheA | cheA-2 | BHWA1_00489 | BHWA1_02542 | Chemotaxis histidine kinase CheA. | Chemotaxis histidine kinase CheA. | 0.919 |
cheA | cheB | BHWA1_00489 | BHWA1_00493 | Chemotaxis histidine kinase CheA. | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
cheA | cheB-2 | BHWA1_00489 | BHWA1_02169 | Chemotaxis histidine kinase CheA. | Two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
cheA | cheD | BHWA1_00489 | BHWA1_00492 | Chemotaxis histidine kinase CheA. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.960 |
cheA | cheR | BHWA1_00489 | BHWA1_00491 | Chemotaxis histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.987 |
cheA | cheR-2 | BHWA1_00489 | BHWA1_01334 | Chemotaxis histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.955 |
cheA | cheW | BHWA1_00489 | BHWA1_00490 | Chemotaxis histidine kinase CheA. | Chemotaxis protein CheW. | 0.999 |
cheA | cheW-2 | BHWA1_00489 | BHWA1_00715 | Chemotaxis histidine kinase CheA. | Purine-binding chemotaxis protein. | 0.998 |
cheA | cheW-3 | BHWA1_00489 | BHWA1_02278 | Chemotaxis histidine kinase CheA. | Putative chemotaxis signal transduction protein. | 0.997 |
cheA | mcpB-4 | BHWA1_00489 | BHWA1_00548 | Chemotaxis histidine kinase CheA. | Methyl-accepting chemotaxis protein McpB. | 0.990 |
cheA-2 | cheA | BHWA1_02542 | BHWA1_00489 | Chemotaxis histidine kinase CheA. | Chemotaxis histidine kinase CheA. | 0.919 |
cheA-2 | cheB | BHWA1_02542 | BHWA1_00493 | Chemotaxis histidine kinase CheA. | Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.998 |
cheA-2 | cheB-2 | BHWA1_02542 | BHWA1_02169 | Chemotaxis histidine kinase CheA. | Two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
cheA-2 | cheD | BHWA1_02542 | BHWA1_00492 | Chemotaxis histidine kinase CheA. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.802 |
cheA-2 | cheR | BHWA1_02542 | BHWA1_00491 | Chemotaxis histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.959 |
cheA-2 | cheR-2 | BHWA1_02542 | BHWA1_01334 | Chemotaxis histidine kinase CheA. | Chemotaxis protein methyltransferase CheR. | 0.959 |
cheA-2 | cheW | BHWA1_02542 | BHWA1_00490 | Chemotaxis histidine kinase CheA. | Chemotaxis protein CheW. | 0.997 |
cheA-2 | cheW-2 | BHWA1_02542 | BHWA1_00715 | Chemotaxis histidine kinase CheA. | Purine-binding chemotaxis protein. | 0.998 |
cheA-2 | cheW-3 | BHWA1_02542 | BHWA1_02278 | Chemotaxis histidine kinase CheA. | Putative chemotaxis signal transduction protein. | 0.998 |
cheA-2 | mcpB-4 | BHWA1_02542 | BHWA1_00548 | Chemotaxis histidine kinase CheA. | Methyl-accepting chemotaxis protein McpB. | 0.992 |
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