STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN83151.14-carboxymuconolactone decarboxylase. (264 aa)    
Predicted Functional Partners:
ACN82778.1
Hypothetical protein.
   
 0.953
ACN83149.1
Conserved hypothetical protein.
 
     0.766
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 
 0.735
ACN83150.1
Aldo/keto reductase.
  
  
 0.622
ACN83152.1
Flavodoxin.
 
     0.594
ACN83153.1
Flavodoxin.
 
     0.561
fadE
acyl-CoA dehydrogenase.
  
  
 0.520
ACN84191.1
Flavin reductase like domain containing protein.
  
  
 0.502
ACN84483.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.498
lysR
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.493
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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