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STRINGSTRING
ompR protein (Brachyspira hyodysenteriae) - STRING interaction network
"ompR" - OmpR in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ompROmpR; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (228 aa)    
Predicted Functional Partners:
ACN83421.1
annotation not available (579 aa)
  0.993
ACN84995.1
annotation not available (796 aa)
   
 
  0.947
ACN82985.1
annotation not available (720 aa)
   
 
  0.947
ACN84013.1
annotation not available (516 aa)
 
  0.844
ACN82897.1
annotation not available (579 aa)
 
   
  0.765
ACN82775.1
annotation not available (591 aa)
   
 
  0.727
ntrY
annotation not available (596 aa)
 
 
  0.719
ACN82769.1
annotation not available (393 aa)
 
 
  0.704
ruvA
Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB (192 aa)
 
          0.690
ACN83182.1
annotation not available (120 aa)
 
 
0.634
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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