STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN83658.1Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family. (275 aa)    
Predicted Functional Partners:
hisM
HisM, ABC-type amino acid transport system, permease component.
 0.998
ACN84036.1
Amino acid transport system permease protein.
 
 0.969
ACN83659.1
Extracellular solute-binding protein, family 3; Belongs to the bacterial solute-binding protein 3 family.
 
  
 
0.955
glnQ
GlnQ, ABC-type polar amino acid transport system, ATPase component.
 
 
 0.895
ACN84035.1
Amino acid ABC transporter, ATP-binding protein.
 
 
 0.852
ACN84013.1
Histidine kinase.
   
 
 0.435
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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