STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN83851.1Outer membrane chaperone Skp (OmpH). (135 aa)    
Predicted Functional Partners:
ACN83850.1
Outer membrane protein.
  
  
 0.891
lpxD
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
  
  
 0.761
ompA-2
OmpA family protein.
  
 
 0.697
ompA-3
Outer membrane protein.
  
 
 0.697
ACN84569.1
Putative peptidoglycan-associated outer membrane lipoprotein.
  
 
 0.697
tia
Tia invasion determinant.
    
 
 0.665
ACN84572.1
OmpA family protein.
    
 
 0.665
Invasin
Invasin; Opacity protein-like surface antigens.
    
 
 0.665
tia-2
Tia invasion determinant.
    
 
 0.665
ACN83849.1
Hypothetical protein.
     
 0.647
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.