STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheCChemotaxis protein CheC. (157 aa)    
Predicted Functional Partners:
cheX
Chemotaxis protein CheX.
  
  
 0.989
cheY-3
Chemotaxis protein CheY.
 
 
 0.965
cheY-2
Chemotaxis response regulator CheY.
  
 
 0.958
cheX-2
Chemotaxis protein CheX.
  
  
0.932
cheY
Chemotaxis response regulator CheY.
   
 
  0.904
ACN84634.1
Two-component response regulator.
  
 
 0.786
ACN83874.1
Hypothetical protein.
       0.773
ACN84013.1
Histidine kinase.
   
 
 0.773
ACN82853.1
Polymerase.
  
     0.711
cheA-2
Chemotaxis histidine kinase CheA.
   
 
 0.658
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.