STRINGSTRING
fumA protein (Brachyspira hyodysenteriae) - STRING interaction network
"fumA" - annotation not available in Brachyspira hyodysenteriae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumAannotation not available (280 aa)    
Predicted Functional Partners:
ACN83922.1
annotation not available (176 aa)
  0.999
mdh
annotation not available (428 aa)
   
 
  0.941
ACN83456.1
annotation not available (223 aa)
   
 
  0.925
ACN83455.1
annotation not available (292 aa)
   
 
  0.925
yjmC
annotation not available (334 aa)
       
  0.911
ACN83962.1
annotation not available (462 aa)
   
 
    0.811
ACN83436.1
annotation not available (398 aa)
     
 
    0.803
ACN83435.1
annotation not available (399 aa)
     
 
    0.803
ACN82879.1
annotation not available (600 aa)
   
   
  0.659
ACN84399.1
annotation not available (754 aa)
         
  0.634
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
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