STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
matEMATE efflux family protein. (615 aa)    
Predicted Functional Partners:
ispD
Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.
       0.746
norM-2
NorM, Na+-driven multidrug efflux pump.
  
     0.661
norM
NorM, Na+-driven multidrug efflux pump.
  
     0.653
norM-4
Na+-driven multidrug efflux pump.
  
     0.631
matE-4
MATE efflux family protein.
  
     0.592
vmrA-2
Multidrug efflux pump VmrA.
  
     0.584
vmrA
Multidrug efflux pump VmrA.
  
     0.563
ACN84045.1
Guanido phosphotransferase protein.
       0.431
ACN84046.1
Uvrb/UvrC protein.
       0.431
ACN84049.1
Putative penicillin binding protein.
       0.427
Your Current Organism:
Brachyspira hyodysenteriae
NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.