Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACN83062.1 | treP | BHWA1_00566 | BHWA1_01831 | Lytic transglycosylase catalytic. | Trep. | 0.539 |
ACN83157.1 | ACN84239.1 | BHWA1_00661 | BHWA1_01774 | NHL repeat containing protein. | Hypothetical protein. | 0.508 |
ACN83157.1 | crp-3 | BHWA1_00661 | BHWA1_00483 | NHL repeat containing protein. | cAMP-binding protein. | 0.485 |
ACN83157.1 | treP | BHWA1_00661 | BHWA1_01831 | NHL repeat containing protein. | Trep. | 0.750 |
ACN83227.1 | treP | BHWA1_00733 | BHWA1_01831 | Hypothetical protein. | Trep. | 0.662 |
ACN83967.1 | crp-3 | BHWA1_01497 | BHWA1_00483 | Hypothetical protein. | cAMP-binding protein. | 0.545 |
ACN83967.1 | treP | BHWA1_01497 | BHWA1_01831 | Hypothetical protein. | Trep. | 0.625 |
ACN84239.1 | ACN83157.1 | BHWA1_01774 | BHWA1_00661 | Hypothetical protein. | NHL repeat containing protein. | 0.508 |
ACN84239.1 | ACN84569.1 | BHWA1_01774 | BHWA1_02111 | Hypothetical protein. | Putative peptidoglycan-associated outer membrane lipoprotein. | 0.428 |
ACN84239.1 | btuB | BHWA1_01774 | BHWA1_00392 | Hypothetical protein. | Putative outer membrane receptor. | 0.808 |
ACN84239.1 | ompA-2 | BHWA1_01774 | BHWA1_01787 | Hypothetical protein. | OmpA family protein. | 0.428 |
ACN84239.1 | ompA-3 | BHWA1_01774 | BHWA1_01788 | Hypothetical protein. | Outer membrane protein. | 0.428 |
ACN84239.1 | treP | BHWA1_01774 | BHWA1_01831 | Hypothetical protein. | Trep. | 0.723 |
ACN84569.1 | ACN84239.1 | BHWA1_02111 | BHWA1_01774 | Putative peptidoglycan-associated outer membrane lipoprotein. | Hypothetical protein. | 0.428 |
ACN84569.1 | ompA-2 | BHWA1_02111 | BHWA1_01787 | Putative peptidoglycan-associated outer membrane lipoprotein. | OmpA family protein. | 0.557 |
ACN84569.1 | treP | BHWA1_02111 | BHWA1_01831 | Putative peptidoglycan-associated outer membrane lipoprotein. | Trep. | 0.732 |
btuB | ACN84239.1 | BHWA1_00392 | BHWA1_01774 | Putative outer membrane receptor. | Hypothetical protein. | 0.808 |
btuB | treP | BHWA1_00392 | BHWA1_01831 | Putative outer membrane receptor. | Trep. | 0.515 |
crp-3 | ACN83157.1 | BHWA1_00483 | BHWA1_00661 | cAMP-binding protein. | NHL repeat containing protein. | 0.485 |
crp-3 | ACN83967.1 | BHWA1_00483 | BHWA1_01497 | cAMP-binding protein. | Hypothetical protein. | 0.545 |
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