ACN84453.1 protein (Brachyspira hyodysenteriae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ACN84453.1

TPR domain-containing protein. (952 aa)

Predicted Functional Partners:

ACN83253.1

0.764

ACN84065.1

0.763

ACN84181.1

0.725

ACN83338.1

0.722

ACN85102.1

0.677

comFC

0.606

ACN82869.1

0.576

ACN83765.1

0.569

ACN83440.1

0.558

hsp90

0.527

Your Current Organism:

Brachyspira hyodysenteriae

NCBI taxonomy Id: 565034
Other names: B. hyodysenteriae WA1, Brachyspira hyodysenteriae WA1, Brachyspira hyodysenteriae str. WA1, Brachyspira hyodysenteriae strain WA1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN82869.1	ACN83253.1	BHWA1_00370	BHWA1_00760	TPR domain-containing protein.	TPR domain-containing protein.	0.699
ACN82869.1	ACN83440.1	BHWA1_00370	BHWA1_00951	TPR domain-containing protein.	TPR domain-containing protein.	0.673
ACN82869.1	ACN83765.1	BHWA1_00370	BHWA1_01286	TPR domain-containing protein.	TPR domain-containing protein.	0.662
ACN82869.1	ACN84065.1	BHWA1_00370	BHWA1_01595	TPR domain-containing protein.	TPR domain-containing protein.	0.427
ACN82869.1	ACN84453.1	BHWA1_00370	BHWA1_01993	TPR domain-containing protein.	TPR domain-containing protein.	0.576
ACN82869.1	comFC	BHWA1_00370	BHWA1_01804	TPR domain-containing protein.	ComFC, Predicted amidophosphoribosyltransferase.	0.606
ACN82869.1	hsp90	BHWA1_00370	BHWA1_02558	TPR domain-containing protein.	Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.	0.527
ACN83253.1	ACN82869.1	BHWA1_00760	BHWA1_00370	TPR domain-containing protein.	TPR domain-containing protein.	0.699
ACN83253.1	ACN83338.1	BHWA1_00760	BHWA1_00845	TPR domain-containing protein.	TPR domain-containing protein.	0.619
ACN83253.1	ACN83765.1	BHWA1_00760	BHWA1_01286	TPR domain-containing protein.	TPR domain-containing protein.	0.640
ACN83253.1	ACN84065.1	BHWA1_00760	BHWA1_01595	TPR domain-containing protein.	TPR domain-containing protein.	0.688
ACN83253.1	ACN84181.1	BHWA1_00760	BHWA1_01715	TPR domain-containing protein.	TPR domain-containing protein.	0.425
ACN83253.1	ACN84453.1	BHWA1_00760	BHWA1_01993	TPR domain-containing protein.	TPR domain-containing protein.	0.764
ACN83253.1	ACN85102.1	BHWA1_00760	BHWA1_02651	TPR domain-containing protein.	TPR domain protein.	0.629
ACN83253.1	comFC	BHWA1_00760	BHWA1_01804	TPR domain-containing protein.	ComFC, Predicted amidophosphoribosyltransferase.	0.606
ACN83253.1	hsp90	BHWA1_00760	BHWA1_02558	TPR domain-containing protein.	Heat shock protein Hsp90; Molecular chaperone. Has ATPase activity.	0.527
ACN83338.1	ACN83253.1	BHWA1_00845	BHWA1_00760	TPR domain-containing protein.	TPR domain-containing protein.	0.619
ACN83338.1	ACN83440.1	BHWA1_00845	BHWA1_00951	TPR domain-containing protein.	TPR domain-containing protein.	0.547
ACN83338.1	ACN83765.1	BHWA1_00845	BHWA1_01286	TPR domain-containing protein.	TPR domain-containing protein.	0.463
ACN83338.1	ACN84065.1	BHWA1_00845	BHWA1_01595	TPR domain-containing protein.	TPR domain-containing protein.	0.578

page 1 of 5

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About