Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACN84639.1 | ACN84641.1 | BHWA1_02181 | BHWA1_02183 | Hypothetical protein. | Hypothetical protein. | 0.705 |
ACN84639.1 | ACN84642.1 | BHWA1_02181 | BHWA1_02184 | Hypothetical protein. | Acriflavin resistance protein; heavy metal efflux pump; cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.409 |
ACN84639.1 | dksA | BHWA1_02181 | BHWA1_02178 | Hypothetical protein. | DNA-binding transcriptional regulator of transcription, DnaK suppressor protein. | 0.436 |
ACN84639.1 | panC | BHWA1_02181 | BHWA1_02182 | Hypothetical protein. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.705 |
ACN84639.1 | priA | BHWA1_02181 | BHWA1_02177 | Hypothetical protein. | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.436 |
ACN84639.1 | rplM | BHWA1_02181 | BHWA1_02180 | Hypothetical protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.529 |
ACN84639.1 | rpsI | BHWA1_02181 | BHWA1_02179 | Hypothetical protein. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.516 |
ACN84641.1 | ACN84639.1 | BHWA1_02183 | BHWA1_02181 | Hypothetical protein. | Hypothetical protein. | 0.705 |
ACN84641.1 | ACN84642.1 | BHWA1_02183 | BHWA1_02184 | Hypothetical protein. | Acriflavin resistance protein; heavy metal efflux pump; cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.442 |
ACN84641.1 | dksA | BHWA1_02183 | BHWA1_02178 | Hypothetical protein. | DNA-binding transcriptional regulator of transcription, DnaK suppressor protein. | 0.404 |
ACN84641.1 | panC | BHWA1_02183 | BHWA1_02182 | Hypothetical protein. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.773 |
ACN84641.1 | priA | BHWA1_02183 | BHWA1_02177 | Hypothetical protein. | Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.404 |
ACN84641.1 | rplM | BHWA1_02183 | BHWA1_02180 | Hypothetical protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.487 |
ACN84641.1 | rpsI | BHWA1_02183 | BHWA1_02179 | Hypothetical protein. | 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.475 |
ACN84642.1 | ACN84639.1 | BHWA1_02184 | BHWA1_02181 | Acriflavin resistance protein; heavy metal efflux pump; cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein. | 0.409 |
ACN84642.1 | ACN84641.1 | BHWA1_02184 | BHWA1_02183 | Acriflavin resistance protein; heavy metal efflux pump; cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Hypothetical protein. | 0.442 |
ACN84642.1 | panC | BHWA1_02184 | BHWA1_02182 | Acriflavin resistance protein; heavy metal efflux pump; cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.459 |
dksA | ACN84639.1 | BHWA1_02178 | BHWA1_02181 | DNA-binding transcriptional regulator of transcription, DnaK suppressor protein. | Hypothetical protein. | 0.436 |
dksA | ACN84641.1 | BHWA1_02178 | BHWA1_02183 | DNA-binding transcriptional regulator of transcription, DnaK suppressor protein. | Hypothetical protein. | 0.404 |
dksA | panC | BHWA1_02178 | BHWA1_02182 | DNA-binding transcriptional regulator of transcription, DnaK suppressor protein. | Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.475 |
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