Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACN83712.1 | pgsA | BHWA1_01233 | BHWA1_02659 | Hypothetical protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.846 |
ACN83750.1 | ACN84013.1 | BHWA1_01271 | BHWA1_01543 | Hypothetical protein. | Histidine kinase. | 0.993 |
ACN83750.1 | birA | BHWA1_01271 | BHWA1_02063 | Hypothetical protein. | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.601 |
ACN83750.1 | birA-2 | BHWA1_01271 | BHWA1_02567 | Hypothetical protein. | Putative biotin-(acetyl-CoA carboxylase) ligase. | 0.601 |
ACN83750.1 | pgsA | BHWA1_01271 | BHWA1_02659 | Hypothetical protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.427 |
ACN84013.1 | ACN83750.1 | BHWA1_01543 | BHWA1_01271 | Histidine kinase. | Hypothetical protein. | 0.993 |
ACN84013.1 | pgsA | BHWA1_01543 | BHWA1_02659 | Histidine kinase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.448 |
ACN85111.1 | ACN85112.1 | BHWA1_02660 | BHWA1_02661 | Hypothetical protein. | Putative ABC transporter, permease protein. | 0.639 |
ACN85111.1 | pgsA | BHWA1_02660 | BHWA1_02659 | Hypothetical protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.503 |
ACN85112.1 | ACN85111.1 | BHWA1_02661 | BHWA1_02660 | Putative ABC transporter, permease protein. | Hypothetical protein. | 0.639 |
ACN85112.1 | pgsA | BHWA1_02661 | BHWA1_02659 | Putative ABC transporter, permease protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.419 |
birA | ACN83750.1 | BHWA1_02063 | BHWA1_01271 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Hypothetical protein. | 0.601 |
birA | birA-2 | BHWA1_02063 | BHWA1_02567 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Putative biotin-(acetyl-CoA carboxylase) ligase. | 0.941 |
birA | folD | BHWA1_02063 | BHWA1_01765 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.416 |
birA | pgsA | BHWA1_02063 | BHWA1_02659 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.429 |
birA-2 | ACN83750.1 | BHWA1_02567 | BHWA1_01271 | Putative biotin-(acetyl-CoA carboxylase) ligase. | Hypothetical protein. | 0.601 |
birA-2 | birA | BHWA1_02567 | BHWA1_02063 | Putative biotin-(acetyl-CoA carboxylase) ligase. | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.941 |
birA-2 | folD | BHWA1_02567 | BHWA1_01765 | Putative biotin-(acetyl-CoA carboxylase) ligase. | Methylenetetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.416 |
birA-2 | pgsA | BHWA1_02567 | BHWA1_02659 | Putative biotin-(acetyl-CoA carboxylase) ligase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.429 |
cdsA | pgsA | BHWA1_00196 | BHWA1_02659 | Phosphatidate cytidylyltransferase. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.930 |
page 1 of 2