Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EED36078.1 | efp | NOR51B_2026 | NOR51B_1970 | Lysine 2,3-aminomutase YodO family protein; [E] COG1509 Lysine 2,3-aminomutase. | Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.703 |
EED36078.1 | yjeA | NOR51B_2026 | NOR51B_1225 | Lysine 2,3-aminomutase YodO family protein; [E] COG1509 Lysine 2,3-aminomutase. | lysyl-tRNA synthetase; [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases. | 0.826 |
efp | EED36078.1 | NOR51B_1970 | NOR51B_2026 | Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | Lysine 2,3-aminomutase YodO family protein; [E] COG1509 Lysine 2,3-aminomutase. | 0.703 |
efp | yjeA | NOR51B_1970 | NOR51B_1225 | Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | lysyl-tRNA synthetase; [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases. | 0.987 |
yjeA | EED36078.1 | NOR51B_1225 | NOR51B_2026 | lysyl-tRNA synthetase; [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases. | Lysine 2,3-aminomutase YodO family protein; [E] COG1509 Lysine 2,3-aminomutase. | 0.826 |
yjeA | efp | NOR51B_1225 | NOR51B_1970 | lysyl-tRNA synthetase; [J] COG0017 Aspartyl/asparaginyl-tRNA synthetases. | Translation elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family. | 0.987 |