STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED35353.1Hypothetical protein. (61 aa)    
Predicted Functional Partners:
gspI
General secretion pathway protein I; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
       0.773
gspJ
General secretion pathway protein J; [U] COG4795 Type II secretory pathway, component PulJ.
       0.773
gspK
General secretion pathway protein K; [U] COG3156 Type II secretory pathway, component PulK.
       0.580
EED36325.1
Hypothetical protein; [U] COG3149 Type II secretory pathway, component PulM.
       0.557
EED36784.1
General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
       0.557
gspN
Bacterial type II secretion system protein N.
       0.459
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.