STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED35517.1[S] COG5345 Uncharacterized protein conserved in bacteria. (354 aa)    
Predicted Functional Partners:
EED35496.1
[S] COG2847 Uncharacterized protein conserved in bacteria.
       0.707
EED35629.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.548
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.529
dsbD
[O] COG0785 Cytochrome c biogenesis protein.
       0.467
EED35262.1
[L] COG2818 3-methyladenine DNA glycosylase.
  
     0.464
EED36118.1
Hypothetical protein; [S] COG1357 Uncharacterized low-complexity proteins; pentapeptide repeat.
 
     0.463
EED34947.1
Conserved hypothetical protein.
  
     0.437
EED36558.1
Hypothetical protein; [O] COG4235 Cytochrome c biogenesis factor; tetratricopeptide TPR_2 repeat protein taxon:351746, putative.
  
     0.435
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.