Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EED34663.1 | EED35680.1 | NOR51B_601 | NOR51B_1627 | Hypothetical protein. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.479 |
EED35680.1 | EED34663.1 | NOR51B_1627 | NOR51B_601 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.479 |
EED35680.1 | EED35682.1 | NOR51B_1627 | NOR51B_1629 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | [E] COG0070 Glutamate synthase domain 3. | 0.448 |
EED35680.1 | EED36460.1 | NOR51B_1627 | NOR51B_2411 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.678 |
EED35680.1 | EED36640.1 | NOR51B_1627 | NOR51B_2592 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | [I] COG1960 Acyl-CoA dehydrogenases. | 0.558 |
EED35680.1 | NOR51B_92 | NOR51B_1627 | NOR51B_92 | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.455 |
EED35682.1 | EED35680.1 | NOR51B_1629 | NOR51B_1627 | [E] COG0070 Glutamate synthase domain 3. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.448 |
EED35682.1 | EED36460.1 | NOR51B_1629 | NOR51B_2411 | [E] COG0070 Glutamate synthase domain 3. | Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.448 |
EED35682.1 | NOR51B_92 | NOR51B_1629 | NOR51B_92 | [E] COG0070 Glutamate synthase domain 3. | Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | 0.703 |
EED36460.1 | EED35680.1 | NOR51B_2411 | NOR51B_1627 | Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.678 |
EED36460.1 | EED35682.1 | NOR51B_2411 | NOR51B_1629 | Transcriptional regulator, LysR family; [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | [E] COG0070 Glutamate synthase domain 3. | 0.448 |
EED36640.1 | EED35680.1 | NOR51B_2592 | NOR51B_1627 | [I] COG1960 Acyl-CoA dehydrogenases. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.558 |
NOR51B_92 | EED35680.1 | NOR51B_92 | NOR51B_1627 | Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | [K] COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.455 |
NOR51B_92 | EED35682.1 | NOR51B_92 | NOR51B_1629 | Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. | [E] COG0070 Glutamate synthase domain 3. | 0.703 |