Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dsbD[O] COG0785 Cytochrome c biogenesis protein. (585 aa)    
Predicted Functional Partners:
EED35244.1
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
 
 0.924
EED35265.1
Periplasmic protein thiol--disulphide oxidoreductase DsbE; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.923
EED34389.1
Redoxin.
  
 
 0.839
EED35553.1
[O] COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
    
 
 0.801
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 
 0.800
EED35896.1
Dsba oxidoreductase; [O] COG1651 Protein-disulfide isomerase.
  
 
 0.756
mauD
Methylamine dehydrogenase accessory protein MauD.
  
 
 0.748
trx
Thioredoxin; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
   
 0.712
EED35572.1
Thioredoxin; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
 
 
 0.621
EED36118.1
Hypothetical protein; [S] COG1357 Uncharacterized low-complexity proteins; pentapeptide repeat.
     
 0.601
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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