STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED36647.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (216 aa)    
Predicted Functional Partners:
EED35719.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
 
     0.942
EED34306.1
Glycosyl transferase, family 9; [M] COG0859 ADP-heptose:LPS heptosyltransferase.
 
     0.847
EED34669.1
Glycosyl transferase, group 1 family; [M] COG0438 Glycosyltransferase.
  
     0.757
EED35294.1
Glycosyl transferase, group 2 family; [S] COG3551 Uncharacterized protein conserved in bacteria.
 
 
 0.651
asnB
Asparagine synthase; [F] COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase.
 
     0.648
EED35619.1
O-Antigen Polymerase family protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
    0.555
EED34353.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold.
  
     0.513
hldE
Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
     0.505
EED34962.1
Conserved hypothetical protein.
 
 
 0.480
EED34647.1
General secretion protein H, putative; [NU] COG4970 Tfp pilus assembly protein FimT.
  
     0.432
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.