STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR51B_5Type 4 fimbrial biogenesis protein PilO; [NU] COG3167 Tfp pilus assembly protein PilO. (204 aa)    
Predicted Functional Partners:
EED34636.1
[NU] COG3166 Tfp pilus assembly protein PilN.
 
 0.998
EED34795.1
[NU] COG3168 Tfp pilus assembly protein PilP.
 
 
 0.997
EED36356.1
[NU] COG4972 Tfp pilus assembly protein, ATPase PilM.
 
 
 0.993
EED34456.1
Fimbrial assembly protein PilQ, putative; [NU] COG1450 Type II secretory pathway, component PulD.
 
  
 0.950
EED35343.1
LysM domain protein; [S] COG1652 Uncharacterized protein containing LysM domain.
  
 
   0.931
EED35415.1
Type 4 fimbrial biogenesis protein PilZ; [NU] COG3215 Tfp pilus assembly protein PilZ.
  
   
 0.792
EED35040.1
Methylation site containing protein; [NU] COG2165 Type II secretory pathway, pseudopilin PulG.
 
   
 0.780
fimT
Pre-pilin like leader sequence; [NU] COG4968 Tfp pilus assembly protein PilE.
 
  
 0.778
EED36097.1
LysM domain protein; [NU] COG3170 Tfp pilus assembly protein FimV.
  
  
 0.776
pilF
Type IV pilus biogenesis/stability protein PilW; [R] COG0457 FOG: TPR repeat.
  
   
 0.741
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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