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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED34648.1N-carbamoylsarcosine amidase; [Q] COG1535 Isochorismate hydrolase. (203 aa)    
Predicted Functional Partners:
EED36979.1
[Q] COG1335 Amidases related to nicotinamidase.
  
  
 
0.891
hyuB_1
[EQ] COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit.
 
  
  0.888
hyuA_1
[EQ] COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
  
  0.820
hyuB_2
[EQ] COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit.
 
  
  0.804
hyuA_2
[EQ] COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
  
  0.691
EED36011.1
[R] COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
 
 0.629
EED35656.1
Sarcosine dehydrogenase; [E] COG0404 Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
 
  0.613
EED34210.1
Bacterial luciferase family protein; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
  0.527
EED34744.1
Glyoxalase family protein; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.525
EED36662.1
Putative monooxygenase RutA; [C] COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
 
  0.490
Your Current Organism:
Luminiphilus syltensis
NCBI taxonomy Id: 565045
Other names: L. syltensis NOR5-1B, Luminiphilus syltensis NOR5-1B, gamma proteobacterium Ivo14
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