STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBRM_04_0530Putative ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. (190 aa)    
Predicted Functional Partners:
LBRM_20_0110
Contig, possible fusion of chromosomes 20 and 34; Belongs to the protein kinase superfamily.
   
 0.968
LBRM_31_2550
Putative ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
  
  
 
0.902
LBRM_31_3150
Putative ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
  
  
 
0.902
LBRM_28_2830
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.738
LBRM_32_1380
Putative ADP-ribosylation factor GTPase activating protein 1.
   
 0.710
LBRM_20_3600
AP-1 complex subunit gamma.
    
 0.700
LBRM_20_5560
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.700
LBRM_20_3170
Contig, possible fusion of chromosomes 20 and 34; Belongs to the PI3/PI4-kinase family.
   
 0.696
LBRM_13_0530
Arf-GAP domain-containing protein.
   
 0.693
LBRM_34_0150
Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex.
   
 0.687
Your Current Organism:
Leishmania braziliensis
NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia
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