STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LBRM_13_1300Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
LBRM_35_4260
Golgi SNARE protein-like protein.
   
 0.854
LBRM_27_1160
Putative vesicular-fusion ATPase-like protein.
   
 0.836
LBRM_20_4990
Contig, possible fusion of chromosomes 20 and 34.
   
 0.836
LBRM_32_0120
Qa-SNARE protein.
    
 0.818
LBRM_26_2290
Putative sec1 family transport protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.816
LBRM_19_0720
Putative synaptobrevin-type transport protein.
    
  0.809
LBRM_34_2040
Putative vesicle-associated membrane protein; Belongs to the synaptobrevin family.
    
 0.799
LBRM_19_0430
QA-SNARE protein putative.
    
 0.789
LBRM_29_0080
QA-SNARE protein putative.
    
 0.789
LBRM_02_0360
Uncharacterized protein.
   
 0.776
Your Current Organism:
Leishmania braziliensis
NCBI taxonomy Id: 5660
Other names: L. braziliensis, Leishmania (V.) braziliensis, Leishmania (Viannia) braziliensis, Leishmania brasiliensis, Leishmania viannia
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