Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LBRM_04_0370 | LBRM_11_0040 | A4H3V3 | A4H6F2 | Putative ADP-ribosylation factor. | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | 0.564 |
LBRM_04_0370 | LBRM_20_3360 | A4H3V3 | A4HB96 | Putative ADP-ribosylation factor. | Contig, possible fusion of chromosomes 20 and 34; Belongs to the actin family. | 0.536 |
LBRM_04_0370 | LBRM_25_1010 | A4H3V3 | A4HE48 | Putative ADP-ribosylation factor. | Putative serine/threonine protein kinase. | 0.446 |
LBRM_04_0370 | LBRM_29_2360 | A4H3V3 | A4HHN8 | Putative ADP-ribosylation factor. | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.451 |
LBRM_04_0370 | LBRM_32_1380 | A4H3V3 | A4HKB0 | Putative ADP-ribosylation factor. | Putative ADP-ribosylation factor GTPase activating protein 1. | 0.710 |
LBRM_04_0370 | LBRM_35_3430 | A4H3V3 | A4HPI7 | Putative ADP-ribosylation factor. | 14-3-3 protein-like protein; Belongs to the 14-3-3 family. | 0.596 |
LBRM_04_1100 | LBRM_14_1170 | A4H424 | A4H7S0 | Uncharacterized protein. | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.425 |
LBRM_04_1100 | LBRM_20_1440 | A4H424 | A4HAQ7 | Uncharacterized protein. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.425 |
LBRM_04_1100 | LBRM_29_2360 | A4H424 | A4HHN8 | Uncharacterized protein. | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.419 |
LBRM_11_0040 | LBRM_04_0370 | A4H6F2 | A4H3V3 | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | Putative ADP-ribosylation factor. | 0.564 |
LBRM_11_0040 | LBRM_14_0140 | A4H6F2 | A4H7H5 | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 0.456 |
LBRM_11_0040 | LBRM_20_3360 | A4H6F2 | A4HB96 | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | Contig, possible fusion of chromosomes 20 and 34; Belongs to the actin family. | 0.456 |
LBRM_11_0040 | LBRM_25_1010 | A4H6F2 | A4HE48 | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | Putative serine/threonine protein kinase. | 0.671 |
LBRM_11_0040 | LBRM_29_2360 | A4H6F2 | A4HHN8 | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.471 |
LBRM_14_0140 | LBRM_11_0040 | A4H7H5 | A4H6F2 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Putative 14-3-3 protein; Belongs to the 14-3-3 family. | 0.456 |
LBRM_14_0140 | LBRM_20_3360 | A4H7H5 | A4HB96 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Contig, possible fusion of chromosomes 20 and 34; Belongs to the actin family. | 0.580 |
LBRM_14_0140 | LBRM_29_2360 | A4H7H5 | A4HHN8 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.415 |
LBRM_14_0140 | LBRM_35_3430 | A4H7H5 | A4HPI7 | Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. | 14-3-3 protein-like protein; Belongs to the 14-3-3 family. | 0.472 |
LBRM_14_1170 | LBRM_04_1100 | A4H7S0 | A4H424 | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Uncharacterized protein. | 0.425 |
LBRM_14_1170 | LBRM_20_3360 | A4H7S0 | A4HB96 | Putative kinesin; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Contig, possible fusion of chromosomes 20 and 34; Belongs to the actin family. | 0.488 |
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