Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LBRM_05_0800 | LBRM_34_0750 | A4H4C5 | A4HMA8 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Conserved CBS domain protein. | 0.598 |
| LBRM_05_0800 | LBRM_34_4100 | A4H4C5 | A4HN82 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | HD domain-containing protein. | 0.718 |
| LBRM_05_0800 | LBRM_34_4300 | A4H4C5 | A4HNA1 | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | Uncharacterized protein. | 0.647 |
| LBRM_07_0020 | LBRM_34_4300 | A4H4U5 | A4HNA1 | Uncharacterized protein. | Uncharacterized protein. | 0.424 |
| LBRM_24_0330 | LBRM_34_4300 | A4HD89 | A4HNA1 | Uncharacterized protein. | Uncharacterized protein. | 0.422 |
| LBRM_26_2630 | LBRM_34_4300 | A4HFB4 | A4HNA1 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | Uncharacterized protein. | 0.425 |
| LBRM_28_2890 | LBRM_34_4300 | A4HGX1 | A4HNA1 | Cytochrome oxidase assembly protein-like protein. | Uncharacterized protein. | 0.405 |
| LBRM_32_3550 | LBRM_34_4300 | A4HKX1 | A4HNA1 | Glucosamine-6-phosphate isomerase. | Uncharacterized protein. | 0.425 |
| LBRM_34_0750 | LBRM_05_0800 | A4HMA8 | A4H4C5 | Conserved CBS domain protein. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.598 |
| LBRM_34_0750 | LBRM_34_4100 | A4HMA8 | A4HN82 | Conserved CBS domain protein. | HD domain-containing protein. | 0.674 |
| LBRM_34_0750 | LBRM_34_4300 | A4HMA8 | A4HNA1 | Conserved CBS domain protein. | Uncharacterized protein. | 0.651 |
| LBRM_34_4100 | LBRM_05_0800 | A4HN82 | A4H4C5 | HD domain-containing protein. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.718 |
| LBRM_34_4100 | LBRM_34_0750 | A4HN82 | A4HMA8 | HD domain-containing protein. | Conserved CBS domain protein. | 0.674 |
| LBRM_34_4100 | LBRM_34_4300 | A4HN82 | A4HNA1 | HD domain-containing protein. | Uncharacterized protein. | 0.453 |
| LBRM_34_4300 | LBRM_05_0800 | A4HNA1 | A4H4C5 | Uncharacterized protein. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.647 |
| LBRM_34_4300 | LBRM_07_0020 | A4HNA1 | A4H4U5 | Uncharacterized protein. | Uncharacterized protein. | 0.424 |
| LBRM_34_4300 | LBRM_24_0330 | A4HNA1 | A4HD89 | Uncharacterized protein. | Uncharacterized protein. | 0.422 |
| LBRM_34_4300 | LBRM_26_2630 | A4HNA1 | A4HFB4 | Uncharacterized protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.425 |
| LBRM_34_4300 | LBRM_28_2890 | A4HNA1 | A4HGX1 | Uncharacterized protein. | Cytochrome oxidase assembly protein-like protein. | 0.405 |
| LBRM_34_4300 | LBRM_32_3550 | A4HNA1 | A4HKX1 | Uncharacterized protein. | Glucosamine-6-phosphate isomerase. | 0.425 |
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