STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_27_1760C-CAP/cofactor C-like domain-containing protein. (571 aa)    
Predicted Functional Partners:
LMJF_32_3810
SHQ1 domain-containing protein.
   
    0.524
LMJF_35_3030
Protein-S-isoprenylcysteine O-methyltransferase.
      
 0.461
LMJF_15_1510
Uncharacterized protein.
      
 0.461
LMJF_35_0050
Putative 2-oxoisovalerate dehydrogenase beta subunit, mitochondrial.
      
 0.459
LMJF_31_2860
Protein kinase domain-containing protein.
      
 0.429
LMJF_35_3860
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
      
 0.424
LMJF_17_1340
CTP_transf_like domain-containing protein.
      
 0.424
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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