STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_29_0200Uncharacterized protein. (1576 aa)    
Predicted Functional Partners:
LMJF_26_1110
Uncharacterized protein.
  
 0.622
LMJF_34_3500
RuvB-like helicase; Belongs to the RuvB family.
    
 0.559
LMJF_35_2850
Uncharacterized protein.
   
 
 0.531
LMJF_30_1300
Uncharacterized protein.
   
0.512
LMJF_15_1450
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.490
LMJF_32_1280
Putative RNA polymerase-like protein.
    
  0.480
LMJF_29_0140
DNA-directed RNA polymerase I-like protein.
   
 0.476
LMJF_19_0660
Putative DNA-directed RNA polymerase,alpha subunit.
   
 0.476
LMJF_28_0810
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.473
LMJF_34_0890
Putative DNA-directed RNA polymerase subunit.
   
 0.463
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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