STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_35_5110PseudoU_synth_2 domain-containing protein. (741 aa)    
Predicted Functional Partners:
L5213T.03
Uncharacterized protein L5213T.03.
  
 
 0.605
LMJF_26_0270
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
  
 
 0.574
LMJF_14_0780
Uncharacterized protein.
  
   0.553
LMJF_16_0160
Putative 50S ribosomal protein L17.
   
   0.552
ACP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.503
LMJF_29_0030
Ribosomal protein L3-like protein.
  
 
 0.473
LMJF_16_0010
Ribosomal_L18e/L15P domain-containing protein.
  
   0.473
LMJF_34_3680
50S ribosomal protein L13-like protein.
  
   0.469
LMJF_35_5210
G domain-containing protein.
   
 
 0.466
LMJF_27_2220
Putative ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.463
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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