STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Alp6Putative actin-like protein; Belongs to the actin family. (323 aa)    
Predicted Functional Partners:
LMJF_06_0700
Uncharacterized protein.
    
 0.955
LMJF_30_1300
Uncharacterized protein.
   
 0.889
ALP4
Putative actin-like protein; Belongs to the actin family.
    
 0.844
Arp2
Putative actin-related protein 2; Belongs to the actin family.
    
 0.780
Arp3
Putative actin-related protein 3 arp3; Belongs to the actin family.
   
 0.774
ARPC1
Putative ARP2/3 complex subunit.
   
 0.756
ARPC4
Putative ARP2/3 complex subunit.
   
 0.742
LMJF_19_1390
Transcription initiation factor-like protein (TFIID-like protein).
   
 0.735
LMJF_32_0520
Profilin; Belongs to the profilin family.
   
 0.721
LMJF_34_3500
RuvB-like helicase; Belongs to the RuvB family.
    
 0.715
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.