STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_36_0535Putative small nuclear ribonucleaoprotein. (141 aa)    
Predicted Functional Partners:
LMJF_33_3190
Small nuclear ribonucleoprotein Sm D2.
   
 0.994
LMJF_32_1070
Putative small nuclear ribonucleoprotein.
   
 0.993
LMJF_30_1205
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.993
LMJF_35_4460
Putative sm-f snRNP core complex protein.
   
 0.992
LMJF_22_1060
Putative small nuclear ribonucleoprotein.
   
 0.991
LMJF_27_1970
Putative small nuclear ribonucleoprotein.
   
 0.985
LMJF_16_1590
Putative U1 small nuclear ribonucleoprotein.
   
 0.979
LMJF_32_2200
Small nuclear ribonucleoprotein component-like protein.
   
 0.976
LMJF_35_3950
U5 snRNA-associated splicing factor.
   
 0.975
LMJF_26_0005
Putative Lsm7p protein.
   
 0.971
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.