STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_34_3020Protein kinase domain-containing protein. (940 aa)    
Predicted Functional Partners:
LMJF_29_1380
Uncharacterized protein.
    
 0.783
LMJF_30_0480
Putative bystin.
    
 0.672
LMJF_30_1360
RIO domain-containing protein.
    
 0.667
LMJF_07_0470
Uncharacterized protein.
    
 0.642
LMJF_36_5060
Uncharacterized protein; Belongs to the NOB1 family.
    
 0.602
LMJF_15_0950
Putative 40S ribosomal protein S3.
    
 0.582
RPS8A
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.556
LMJF_35_3540
KH domain-containing protein.
    
 0.530
LMJF_28_1010
Putative ribosomal protein S20.
    
 0.520
LMJF_11_1190
Putative 40S ribosomal protein S15A; Belongs to the universal ribosomal protein uS8 family.
 
  
  0.513
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.