STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_13_1670Putative 60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)    
Predicted Functional Partners:
RPL11
60S ribosomal protein L11; Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through [...]
   
 0.999
LMJF_36_1070
Putative ribosomal protein L24.
   
 0.999
LMJF_34_1110
Shwachman-Bodian-Diamond protein-like protein.
   
   0.999
LMJF_03_0250
Putative ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
LMJF_24_2050
Putative 60S ribosomal protein L26.
   
 0.999
LMJF_10_0070
Putative ribosomal protein l35a.
   
 0.999
LMJF_29_1070
Putative ribosomal protein L1a.
   
 0.998
LMJF_35_3280
Putative 60S ribosomal subunit protein L31.
   
 0.998
LMJF_35_3760
Putative 60S ribosomal protein L27A/L29.
   
 0.998
LMJF_32_3900
Putative 60S ribosomal protein L2.
  
 0.998
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.