STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_33_1910WD_REPEATS_REGION domain-containing protein. (584 aa)    
Predicted Functional Partners:
LmjF11.0410
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.970
LMJF_03_0900
Putative peter pan protein.
   
    0.917
LMJF_32_3130
Putative ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.882
LMJF_18_1610
Uncharacterized protein.
   
 
 0.866
LMJF_36_4650
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.851
LMJF_36_4210
Uncharacterized protein.
   
 
 0.851
LMJF_20_0650
rRNA biogenesis protein-like protein.
   
 
 0.838
LMJF_33_0060
WD_REPEATS_REGION domain-containing protein.
   
  
 0.836
LMJF_18_0830
Periodic tryptophan protein 2-like protein.
   
  
 0.834
LMJF_30_0480
Putative bystin.
   
  
 0.824
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
Server load: low (22%) [HD]