STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_33_1900Putative vesicular protein trafficking mediator. (204 aa)    
Predicted Functional Partners:
LMJF_27_1440
Uncharacterized protein.
   
 0.990
LMJF_05_0740
Uncharacterized protein.
    
 0.989
VPS4
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
   
 0.981
LMJF_34_3350
ATPase-like protein; Belongs to the AAA ATPase family.
   
 0.981
LMJF_36_3440
SNF7-like protein.
 
 
 0.946
LMJF_36_3850
Uncharacterized protein.
    
 0.935
LMJF_35_4400
Uncharacterized protein.
  
  
 
0.904
LMJF_26_0380
Uncharacterized protein.
    
 
 0.899
LMJF_35_0580
Conserved SNF-7-like protein.
   
 
 0.858
LMJF_16_0930
Uncharacterized protein.
   
 0.813
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.