STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_33_1700Putative DNA-dependent ATPase. (1103 aa)    
Predicted Functional Partners:
LMJF_32_1875
Uncharacterized protein.
    
 0.779
LMJF_17_0280
Histone H2A; Belongs to the histone H2A family.
   
 0.676
LMJF_26_1110
Uncharacterized protein.
  
 0.622
LMJF_26_0870
Uncharacterized protein.
     
 0.591
LMJF_19_0660
Putative DNA-directed RNA polymerase,alpha subunit.
   
 0.588
LMJF_30_1300
Uncharacterized protein.
   
0.578
LMJF_14_1240
Uncharacterized protein.
   
 0.577
LMJF_08_0470
Putative small ubiquitin protein.
   
 0.574
LMJF_28_2570
Putative splicing factor 3B subunit 1.
   
  0.569
LMJF_25_0620
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.569
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.