STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_32_2650SpoU_methylase domain-containing protein. (2043 aa)    
Predicted Functional Partners:
LMJF_36_3000
Putative ATP-dependent RNA helicase.
   
    0.762
L5213T.03
Uncharacterized protein L5213T.03.
   
 
 0.758
LMJF_16_0160
Putative 50S ribosomal protein L17.
  
 
 0.751
LMJF_14_0780
Uncharacterized protein.
   
   0.745
LMJF_04_0270
Uncharacterized protein.
   
 
 0.745
LMJF_26_0270
GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis.
   
 
 0.732
ACP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.720
LMJF_31_1550
L51_S25_CI-B8 domain-containing protein.
    
   0.716
LMJF_20_0650
rRNA biogenesis protein-like protein.
  
   0.707
LMJF_35_0670
DRIM domain-containing protein.
   
    0.688
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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