Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACP | LMJF_27_0740 | E9AD06 | E9AD51 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | 0.999 |
ACP | LMJF_29_0690 | E9AD06 | E9ADS1 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.540 |
ACP | LMJF_32_2210 | E9AD06 | Q4Q554 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.540 |
ACP | LMJF_32_2620 | E9AD06 | Q4Q513 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.540 |
ACP | LMJF_32_3170 | E9AD06 | Q4Q4V5 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Putative NADH dehydrogenase subunit NI8M. | 0.540 |
ACP | LMJF_34_4320 | E9AD06 | Q4Q291 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | ORF-q. | 0.540 |
ACP | LMJF_35_0220 | E9AD06 | E9AEJ9 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.540 |
ACP | LMJF_35_3040 | E9AD06 | E9AFC8 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.540 |
ACP | LMJF_35_3670 | E9AD06 | E9AFJ1 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.540 |
ACP | LMJF_36_3520 | E9AD06 | Q4Q166 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Uncharacterized protein. | 0.540 |
LMJF_27_0740 | ACP | E9AD51 | E9AD06 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.999 |
LMJF_27_0740 | LMJF_29_0690 | E9AD51 | E9ADS1 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein. | 0.540 |
LMJF_27_0740 | LMJF_32_2210 | E9AD51 | Q4Q554 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.540 |
LMJF_27_0740 | LMJF_32_2620 | E9AD51 | Q4Q513 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein. | 0.621 |
LMJF_27_0740 | LMJF_32_3170 | E9AD51 | Q4Q4V5 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Putative NADH dehydrogenase subunit NI8M. | 0.540 |
LMJF_27_0740 | LMJF_34_4320 | E9AD51 | Q4Q291 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | ORF-q. | 0.540 |
LMJF_27_0740 | LMJF_35_0220 | E9AD51 | E9AEJ9 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein. | 0.621 |
LMJF_27_0740 | LMJF_35_3040 | E9AD51 | E9AFC8 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.540 |
LMJF_27_0740 | LMJF_35_3670 | E9AD51 | E9AFJ1 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein. | 0.540 |
LMJF_27_0740 | LMJF_36_3520 | E9AD51 | Q4Q166 | NADH-ubiquinone oxidoreductase 20 kDa subunit,mitochondrial; Belongs to the complex I 20 kDa subunit family. | Uncharacterized protein. | 0.540 |
page 1 of 6