STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_31_2670Uncharacterized protein. (841 aa)    
Predicted Functional Partners:
LMJF_08_0140
Putative DNA repair protein.
   
 0.803
LMJF_29_2000
SAM_MT_RSMB_NOP domain-containing protein.
    
 0.649
LMJF_34_2480
Uncharacterized protein.
    
 0.649
GLF
UDP-galactopyranose mutase.
    
 0.649
LMJF_24_1520
SAP domain-containing protein.
   
 0.614
LMJF_22_0070
Uncharacterized protein.
    
 0.588
LMJF_17_0630
Uncharacterized protein.
   
 0.534
LMJF_25_1290
NPL4 domain-containing protein.
    
 0.529
LMJF_10_0850
Putative nuclear transport factor 2.
    
 0.522
LMJF_36_0210
Putative SET domain protein.
     
 0.516
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.