Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LMJF_18_0600 | LMJF_21_1552 | Q4QDY1 | Q4QC38 | Uncharacterized protein. | Putative RNA helicase. | 0.606 |
| LMJF_18_0600 | LMJF_26_0780 | Q4QDY1 | Q4Q9B6 | Uncharacterized protein. | RRM domain-containing protein. | 0.934 |
| LMJF_18_0600 | LMJF_28_1530 | Q4QDY1 | Q4Q8B2 | Uncharacterized protein. | Putative ATP dependent DEAD-box helicase; Belongs to the DEAD box helicase family. | 0.951 |
| LMJF_18_0600 | LMJF_30_0540 | Q4QDY1 | Q4Q7Q2 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.930 |
| LMJF_18_0600 | LMJF_30_1205 | Q4QDY1 | Q4Q7I2 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.837 |
| LMJF_18_0600 | LMJF_30_3560 | Q4QDY1 | Q4Q6T2 | Uncharacterized protein. | Putative mago nashi-like protein. | 0.934 |
| LMJF_18_0600 | LMJF_35_4460 | Q4QDY1 | E9AFS3 | Uncharacterized protein. | Putative sm-f snRNP core complex protein. | 0.831 |
| LMJF_18_0600 | LMJF_36_5160 | Q4QDY1 | Q4Q0P6 | Uncharacterized protein. | MI domain-containing protein. | 0.539 |
| LMJF_18_0600 | LmjF.01.0770 | Q4QDY1 | O62591 | Uncharacterized protein. | Probable eukaryotic initiation factor 4A; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity). | 0.658 |
| LMJF_21_1552 | LMJF_18_0600 | Q4QC38 | Q4QDY1 | Putative RNA helicase. | Uncharacterized protein. | 0.606 |
| LMJF_21_1552 | LMJF_26_0290 | Q4QC38 | Q4Q9G2 | Putative RNA helicase. | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | 0.753 |
| LMJF_21_1552 | LMJF_26_0780 | Q4QC38 | Q4Q9B6 | Putative RNA helicase. | RRM domain-containing protein. | 0.975 |
| LMJF_21_1552 | LMJF_28_1530 | Q4QC38 | Q4Q8B2 | Putative RNA helicase. | Putative ATP dependent DEAD-box helicase; Belongs to the DEAD box helicase family. | 0.982 |
| LMJF_21_1552 | LMJF_30_0540 | Q4QC38 | Q4Q7Q2 | Putative RNA helicase. | Nuclear cap-binding protein subunit 2. | 0.855 |
| LMJF_21_1552 | LMJF_30_1205 | Q4QC38 | Q4Q7I2 | Putative RNA helicase. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.573 |
| LMJF_21_1552 | LMJF_30_3560 | Q4QC38 | Q4Q6T2 | Putative RNA helicase. | Putative mago nashi-like protein. | 0.915 |
| LMJF_21_1552 | LMJF_35_4460 | Q4QC38 | E9AFS3 | Putative RNA helicase. | Putative sm-f snRNP core complex protein. | 0.622 |
| LMJF_21_1552 | LMJF_36_5160 | Q4QC38 | Q4Q0P6 | Putative RNA helicase. | MI domain-containing protein. | 0.896 |
| LMJF_26_0290 | LMJF_21_1552 | Q4Q9G2 | Q4QC38 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | Putative RNA helicase. | 0.753 |
| LMJF_26_0290 | LMJF_26_0780 | Q4Q9G2 | Q4Q9B6 | Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] | RRM domain-containing protein. | 0.730 |
page 1 of 5