STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_30_3010Uncharacterized protein. (847 aa)    
Predicted Functional Partners:
LMJF_24_0420
Ubiquitin carboxyl-terminal hydrolase.
    
 0.808
LMJF_17_0150
Uncharacterized protein.
    
  0.555
LMJF_07_0100
Pitrilysin-like metalloprotease; Belongs to the peptidase M16 family.
   
    0.516
LMJF_29_2490
Protein kinase domain-containing protein.
   
  0.515
LMJF_36_4380
Alternative oxidase.
   
  0.515
LMJF_32_3050
Roc domain-containing protein.
   
  0.515
LMJF_31_1840
Protein kinase domain-containing protein.
   
  0.515
LMJF_36_2210
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
   
    0.514
LMJF_14_0380
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
   
    0.514
LMJF_06_0950
Putative glucosamine-fructose-6-phosphate aminotransferase.
     
 0.487
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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