STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMJF_30_1490Class i nuclease-like protein. (163 aa)    
Predicted Functional Partners:
LMJF_13_1450
EF hand-like protein.
      
 0.790
LMJF_11_0690
ANK_REP_REGION domain-containing protein.
   
 0.518
haspa2
Hydrophilic acylated surface protein a.
      
 0.495
HASPB2
Hydrophilic acylated surface protein b.
      
 0.491
LMJF_34_0030
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.425
LMJF_08_0530
Protein kinase domain-containing protein.
    
 0.425
Your Current Organism:
Leishmania major
NCBI taxonomy Id: 5664
Other names: L. major, Leishmania (Leishmania) major, Leishmania tropica major
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